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LOC100813377 homeobox-leucine zipper protein HAT22 [ Glycine max (soybean) ]

Gene ID: 100813377, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100813377
Gene description
homeobox-leucine zipper protein HAT22
Locus tag
GLYMA_17G056300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 17
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 17 NC_038253.2 (4276821..4278487, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 17 NC_038253.1 (4273614..4275439, complement)

Chromosome 17 - NC_038253.2Genomic Context describing neighboring genes Neighboring gene cold-responsive protein kinase 1 Neighboring gene protein trichome birefringence-like 5 Neighboring gene uncharacterized LOC100808348 Neighboring gene uncharacterized LOC102661714

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein HAT22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038253.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    4276821..4278487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003550591.5 → XP_003550639.1  homeobox-leucine zipper protein HAT22

    UniProtKB/TrEMBL
    I1MSI4
    Conserved Domains (2) summary
    smart00389
    Location:92 → 146
    HOX; Homeodomain
    cl23880
    Location:148 → 187
    HALZ; Homeobox associated leucine zipper
Nucleotide Protein
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