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LOC100808138 AP2-like ethylene-responsive transcription factor CRL5 [ Glycine max (soybean) ]

Gene ID: 100808138, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100808138
Gene description
AP2-like ethylene-responsive transcription factor CRL5
Locus tag
GLYMA_14G089200v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (8346010..8349936)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (8095453..8099455)

Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100801397 Neighboring gene probable WRKY transcription factor 17 Neighboring gene germin-like protein subfamily 3 member 4 Neighboring gene uncharacterized LOC100809744 Neighboring gene ribulose bisphosphate carboxylase small chain 1, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP2-like ethylene-responsive transcription factor CRL5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    8346010..8349936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014766550.3 → XP_014622036.1  AP2-like ethylene-responsive transcription factor CRL5

    UniProtKB/TrEMBL
    K7M5S1
    Conserved Domains (1) summary
    smart00380
    Location:331 → 394
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version

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