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LOC100805707 probable WRKY transcription factor 14 [ Glycine max (soybean) ]

Gene ID: 100805707, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100805707
Gene description
probable WRKY transcription factor 14
Locus tag
GLYMA_09G029800v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100805707 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (2449589..2454763, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (2453029..2457550, complement)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene annexin D8 Neighboring gene C-factor Neighboring gene acetate/butyrate--CoA ligase AAE7, peroxisomal Neighboring gene cell division control protein 2 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    2449589..2454763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041005331.1 → XP_040861265.1  probable WRKY transcription factor 14 isoform X2

    UniProtKB/TrEMBL
    A0A0R0I318
    Conserved Domains (1) summary
    smart00774
    Location:267 → 325
    WRKY; DNA binding domain

  2. XM_003534748.5 → XP_003534796.2  probable WRKY transcription factor 14 isoform X1

    UniProtKB/TrEMBL
    A0A0R0I318, K7LBI7
    Conserved Domains (1) summary
    smart00774
    Location:267 → 325
    WRKY; DNA binding domain

  3. XM_006586799.4 → XP_006586862.1  probable WRKY transcription factor 14 isoform X3

    UniProtKB/TrEMBL
    A0A0R0I312, A0A0R0I318
    Conserved Domains (1) summary
    smart00774
    Location:267 → 325
    WRKY; DNA binding domain

  4. XM_041005330.1 → XP_040861264.1  probable WRKY transcription factor 14 isoform X1

    UniProtKB/TrEMBL
    A0A0R0I318, K7LBI7
    Conserved Domains (1) summary
    smart00774
    Location:267 → 325
    WRKY; DNA binding domain

RNA

  1. XR_005886487.1 RNA Sequence

  2. XR_005886488.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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