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LOC100804773 probable WRKY transcription factor 35 [ Glycine max (soybean) ]

Gene ID: 100804773, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100804773
Gene description
probable WRKY transcription factor 35
Locus tag
GLYMA_15G135600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100804773 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 15 NC_038251.2 (10857192..10861626, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 15 NC_038251.1 (10921847..10925625, complement)

Chromosome 15 - NC_038251.2Genomic Context describing neighboring genes Neighboring gene annexin D8 Neighboring gene C-factor Neighboring gene acetate/butyrate--CoA ligase AAE7, peroxisomal-like Neighboring gene p34cdc2 protein kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 35

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038251.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    10857192..10861626 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041010014.1 → XP_040865948.1  probable WRKY transcription factor 35 isoform X1

    UniProtKB/TrEMBL
    A0A0R0G147
    Conserved Domains (1) summary
    smart00774
    Location:287 → 345
    WRKY; DNA binding domain

  2. XM_006597613.4 → XP_006597676.1  probable WRKY transcription factor 35 isoform X2

    UniProtKB/TrEMBL
    A0A0R0G0D8, A0A0R0G147
    Conserved Domains (1) summary
    smart00774
    Location:287 → 345
    WRKY; DNA binding domain

RNA

  1. XR_003264708.2 RNA Sequence

  2. XR_003264709.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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