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LOC100804384 ethylene-responsive transcription factor ERF017 [ Glycine max (soybean) ]

Gene ID: 100804384, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100804384
Gene description
ethylene-responsive transcription factor ERF017
Locus tag
GLYMA_13G112400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100804384 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (21604858..21605802, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (22577263..22578251, complement)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene FCS-Like Zinc finger 13 Neighboring gene beta-galactosidase 15 Neighboring gene 20 kDa chaperonin, chloroplastic Neighboring gene auxin response factor 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF017

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    21604858..21605802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003542323.5 → XP_003542371.3  ethylene-responsive transcription factor ERF017

    UniProtKB/TrEMBL
    I1LY83
    Conserved Domains (1) summary
    smart00380
    Location:19 → 80
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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