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LOC100798081 probable transcription factor KAN2 [ Glycine max (soybean) ]

Gene ID: 100798081, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100798081
Gene description
probable transcription factor KAN2
Locus tag
GLYMA_09G207300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100798081 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (44033154..44038597, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (43143884..43149352, complement)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100527045 Neighboring gene plastoglobulin-1, chloroplastic-like Neighboring gene inactive poly [ADP-ribose] polymerase RCD1 Neighboring gene lysine-specific demethylase JMJ706 Neighboring gene homeobox-leucine zipper protein ROC3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in abaxial cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable transcription factor KAN2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    44033154..44038597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006587537.4 → XP_006587600.1  probable transcription factor KAN2

    See identical proteins and their annotated locations for XP_006587600.1

    UniProtKB/TrEMBL
    K7LF36, K7LF37
    Conserved Domains (2) summary
    TIGR01557
    Location:209 → 262
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:148 → 262
    PLN03162; golden-2 like transcription factor; Provisional
Nucleotide Protein
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