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LOC100797466 protein REVEILLE 8 [ Glycine max (soybean) ]

Gene ID: 100797466, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100797466
Gene description
protein REVEILLE 8
Locus tag
GLYMA_13G136300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100797466 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (23981638..23988536)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (24891042..24897712)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 6 subunit A Neighboring gene zinc finger CCCH domain-containing protein 11-like Neighboring gene uncharacterized LOC100779234 Neighboring gene 60S ribosomal protein L4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein REVEILLE 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    23981638..23988536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003541352.5 → XP_003541400.1  protein REVEILLE 8 isoform X2

    See identical proteins and their annotated locations for XP_003541400.1

    UniProtKB/TrEMBL
    I1LZ00, Q0PJJ0
    Conserved Domains (1) summary
    TIGR01557
    Location:33 → 83
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

  2. XM_014765502.3 → XP_014620988.1  protein REVEILLE 8 isoform X1

    UniProtKB/TrEMBL
    A0A0R0GUJ1, Q0PJJ0
    Conserved Domains (2) summary
    TIGR01557
    Location:33 → 83
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    smart00717
    Location:35 → 80
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

  3. XM_041008081.1 → XP_040864015.1  protein REVEILLE 8 isoform X3

    UniProtKB/TrEMBL
    I1LZ02, Q0PJJ0
    Conserved Domains (1) summary
    TIGR01557
    Location:33 → 83
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

  4. XM_041008080.1 → XP_040864014.1  protein REVEILLE 8 isoform X2

    UniProtKB/TrEMBL
    I1LZ00, Q0PJJ0
    Conserved Domains (1) summary
    TIGR01557
    Location:33 → 83
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

  5. XM_006594043.4 → XP_006594106.1  protein REVEILLE 8 isoform X3

    See identical proteins and their annotated locations for XP_006594106.1

    UniProtKB/TrEMBL
    I1LZ02, Q0PJJ0
    Conserved Domains (1) summary
    TIGR01557
    Location:33 → 83
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

  6. XM_006594045.4 → XP_006594108.1  protein REVEILLE 8 isoform X4

    UniProtKB/TrEMBL
    I1LZ01, Q0PJJ0
    Conserved Domains (1) summary
    TIGR01557
    Location:33 → 83
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
Nucleotide Protein
Heading Accession and Version

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