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LOC100794828 MYB/HD-like transcription factor [ Glycine max (soybean) ]

Gene ID: 100794828, updated on 18-Aug-2023

Summary

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Gene symbol
LOC100794828
Gene description
MYB/HD-like transcription factor
Locus tag
GLYMA_13G141900v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100794828 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (24527261..24529401)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (25437604..25439744)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100793792 Neighboring gene protein PTST homolog 3, chloroplastic Neighboring gene uncharacterized LOC100795364 Neighboring gene ABC transporter B family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance. Chai C, et al. BMC Genomics, 2015 Aug 13. PMID 26268547, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
MYB/HD-like transcription factor
Names
transcription factor RAX2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001354921.1 → NP_001341850.1  MYB/HD-like transcription factor

    Status: VALIDATED

    Source sequence(s)
    ACUP04004699, BT097246
    UniProtKB/TrEMBL
    A0A0K2CTJ8, I1LZ65
    Conserved Domains (1) summary
    PLN03091
    Location:1 → 152
    PLN03091; hypothetical protein; Provisional

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    24527261..24529401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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