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LOC100786452 transcription factor CYCLOIDEA [ Glycine max (soybean) ]

Gene ID: 100786452, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100786452
Gene description
transcription factor CYCLOIDEA
Locus tag
GLYMA_18G280700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100786452 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (56431262..56433407, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (56160062..56162013, complement)

Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene translation initiation factor eIF-2B subunit delta Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene uncharacterized LOC100804662 Neighboring gene allene oxide cyclase 4, chloroplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of secondary shoot formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor CYCLOIDEA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    56431262..56433407 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003551750.5 → XP_003551798.1  transcription factor CYCLOIDEA

    See identical proteins and their annotated locations for XP_003551798.1

    UniProtKB/TrEMBL
    K7MV75
    Conserved Domains (1) summary
    pfam03634
    Location:100 → 228
    TCP; TCP family transcription factor
Nucleotide Protein
Heading Accession and Version

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