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LOC100784593 transcription factor VOZ1 [ Glycine max (soybean) ]

Gene ID: 100784593, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100784593
Gene description
transcription factor VOZ1
Locus tag
GLYMA_13G152236v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100784593 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (25892913..25896220)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (30435726..30439020, complement)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 94C1 Neighboring gene secreted RxLR effector protein 161-like Neighboring gene transcription elongation factor 1 homolog Neighboring gene uncharacterized LOC100785118

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of long-day photoperiodism, flowering IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor VOZ1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    25892913..25896220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041008146.1 → XP_040864080.1  transcription factor VOZ1 isoform X1

    UniProtKB/TrEMBL
    A0A0R0HKC7

  2. XM_041008147.1 → XP_040864081.1  transcription factor VOZ1 isoform X2

    UniProtKB/TrEMBL
    I1LZH0, K7LZW9

  3. XM_006594138.4 → XP_006594201.1  transcription factor VOZ1 isoform X1

    See identical proteins and their annotated locations for XP_006594201.1

    UniProtKB/TrEMBL
    A0A0R0HKC7

  4. XM_006594140.3 → XP_006594203.1  transcription factor VOZ1 isoform X2

    UniProtKB/TrEMBL
    I1LZH0, K7LZW9
Nucleotide Protein
Heading Accession and Version

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