U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100778376 transcription factor bHLH18 [ Glycine max (soybean) ]

Gene ID: 100778376, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100778376
Gene description
transcription factor bHLH18
Locus tag
GLYMA_07G027200v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100778376 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (2146697..2149830, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (2143846..2146882, complement)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor ERF084 Neighboring gene transcription factor bHLH18 Neighboring gene transcription factor bHLH25 Neighboring gene polyphenol oxidase A1, chloroplastic-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor bHLH18

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    2146697..2149830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003529742.5 → XP_003529790.1  transcription factor bHLH18

    UniProtKB/TrEMBL
    I1KGX1
    Conserved Domains (1) summary
    cl00081
    Location:157 → 230
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases