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LOC100775390 AP2-like ethylene-responsive transcription factor AIL6 [ Glycine max (soybean) ]

Gene ID: 100775390, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100775390
Gene description
AP2-like ethylene-responsive transcription factor AIL6
Locus tag
GLYMA_09G199800v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100775390 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (43316670..43321819)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (42427964..42433237)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene nucleobase-ascorbate transporter 11 Neighboring gene putative U-box domain-containing protein 50 Neighboring gene receptor-like cytosolic serine/threonine-protein kinase RBK1 Neighboring gene uncharacterized LOC100776834

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP2-like ethylene-responsive transcription factor AIL6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    43316670..43321819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006587514.4 → XP_006587577.1  AP2-like ethylene-responsive transcription factor AIL6

    See identical proteins and their annotated locations for XP_006587577.1

    UniProtKB/TrEMBL
    A0A0R0IAV8
    Conserved Domains (2) summary
    smart00380
    Location:223 → 295
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    cl00033
    Location:325 → 389
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein
Heading Accession and Version

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