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Asb2 ankyrin repeat and SOCS box containing 2 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100735515, updated on 8-Mar-2024

Summary

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Gene symbol
Asb2
Gene description
ankyrin repeat and SOCS box containing 2
See related
Ensembl:ENSCPOG00000002180
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Asb2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947514.1 (11194153..11228111, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176290.1 (852055..886000)

NW_026947514.1Genomic Context describing neighboring genes Neighboring gene proline rich membrane anchor 1 Neighboring gene uncharacterized LOC134474233 Neighboring gene family with sequence similarity 181 member A Neighboring gene uncharacterized LOC106025906 Neighboring gene U6 spliceosomal RNA Neighboring gene coiled-coil domain containing 197

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947514.1 Reference mCavPor4.1

    Range
    11194153..11228111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003462632.4 → XP_003462680.1  ankyrin repeat and SOCS box protein 2

    UniProtKB/TrEMBL
    H0UXY1
    Related
    ENSCPOP00000001976.2
    Conserved Domains (5) summary
    cd00204
    Location:237 → 362
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:247 → 339
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:242 → 273
    ANK; ANK repeat [structural motif]
    cl02529
    Location:443 → 474
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cl02533
    Location:596 → 640
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
Nucleotide Protein
Heading Accession and Version

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