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Ints5 integrator complex subunit 5 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100731097, updated on 8-Mar-2024

Summary

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Gene symbol
Ints5
Gene description
integrator complex subunit 5
See related
Ensembl:ENSCPOG00000003669
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Ints5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (57860782..57865226, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176375.1 (15108351..15112783)

NW_026947500.1Genomic Context describing neighboring genes Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene uncharacterized LOC134470994 Neighboring gene glucosidase II alpha subunit Neighboring gene chromosome unknown C11orf98 homolog Neighboring gene small nucleolar RNA SNORA57 Neighboring gene citrate synthase lysine methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of integrator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrator complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947500.1 Reference mCavPor4.1

    Range
    57860782..57865226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003467920.5 → XP_003467968.1  integrator complex subunit 5

    UniProtKB/TrEMBL
    H0V1E8
    Related
    ENSCPOP00000003311.3
    Conserved Domains (2) summary
    pfam14837
    Location:31 → 253
    INTS5_N; Integrator complex subunit 5 N-terminus
    pfam14838
    Location:292 → 998
    INTS5_C; Integrator complex subunit 5 C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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