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Cry1 cryptochrome circadian regulator 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100714070, updated on 8-Mar-2024

Summary

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Gene symbol
Cry1
Gene description
cryptochrome circadian regulator 1
See related
Ensembl:ENSCPOG00000005154
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Cry1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947491.1 (93697938..93755867, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176279.1 (45742..103786, complement)

NW_026947491.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 263 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene uncharacterized LOC134477431 Neighboring gene uncharacterized LOC134477432

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cryptochrome-1
Names
cryptochrome 1 (photolyase-like)
cryptochrome circadian clock 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947491.1 Reference mCavPor4.1

    Range
    93697938..93755867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013142888.3 → XP_012998342.1  cryptochrome-1

    UniProtKB/TrEMBL
    A0A286XNT6, H0V4T1
    Related
    ENSCPOP00000027151.1
    Conserved Domains (3) summary
    COG0415
    Location:6 → 491
    PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
    pfam00875
    Location:5 → 153
    DNA_photolyase; DNA photolyase
    pfam03441
    Location:213 → 486
    FAD_binding_7; FAD binding domain of DNA photolyase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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