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MIR4520-1 microRNA 4520-1 [ Homo sapiens (human) ]

Gene ID: 100616401, updated on 17-Sep-2024

Summary

Official Symbol
MIR4520-1provided by HGNC
Official Full Name
microRNA 4520-1provided by HGNC
Primary source
HGNC:HGNC:41775
See related
Ensembl:ENSG00000264468 miRBase:MI0016886; AllianceGenome:HGNC:41775
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIR4520A; mir-4520-1; hsa-mir-4520-1
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR4520-1 in Genome Data Viewer
Location:
17p13.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (6655440..6655509, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (6556069..6556138, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (6558759..6558828, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene thioredoxin domain containing 17 Neighboring gene mediator complex subunit 31 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11587 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11588 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11589 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8077 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8078 Neighboring gene chromosome 17 open reading frame 100 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6558426-6558998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6560276-6560912 Neighboring gene microRNA 4520-2 Neighboring gene arachidonate 15-lipoxygenase pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:6573510-6573664 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6580069-6580829 Neighboring gene solute carrier family 13 member 5 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:6604268-6605180 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:6606329-6607039

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039745.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC004706
    Related
    ENST00000582609.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    6655440..6655509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    6556069..6556138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)