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LOC100500588 uncharacterized LOC100500588 [ Glycine max (soybean) ]

Gene ID: 100500588, updated on 7-Dec-2023

Summary

Gene symbol
LOC100500588
Gene description
uncharacterized LOC100500588
Locus tag
GLYMA_12G069100v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

See LOC100500588 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 12 NC_038248.2 (5050822..5053042, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 12 NC_038248.1 (5064839..5067075, complement)

Chromosome 12 - NC_038248.2Genomic Context describing neighboring genes Neighboring gene fasciclin-like arabinogalactan protein 11 Neighboring gene beta-galactosidase 8-like Neighboring gene uncharacterized LOC112998531 Neighboring gene fasciclin-like arabinogalactan protein 12

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein LOC100500588

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001249540.2NP_001236469.2  uncharacterized protein LOC100500588

    Status: VALIDATED

    Source sequence(s)
    ACUP04004057, BT091529
    UniProtKB/TrEMBL
    C6T271, I1LQX2
    Conserved Domains (1) summary
    cl23735
    Location:90179
    H4; Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic nucleosome core; along with H3, it plays a central role in nucleosome formation; histones bind to DNA and wrap the genetic material into "beads on a string" in ...

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038248.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    5050822..5053042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006591780.3XP_006591843.1  uncharacterized protein LOC100500588 isoform X1

    UniProtKB/TrEMBL
    C6T271, I1LQX3
    Conserved Domains (1) summary
    cl23735
    Location:90152
    H4; Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic nucleosome core; along with H3, it plays a central role in nucleosome formation; histones bind to DNA and wrap the genetic material into "beads on a string" in ...