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olfml2b olfactomedin like 2B [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100498044, updated on 4-Nov-2024

Summary

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Official Symbol
olfml2bprovided by Xenbase
Official Full Name
olfactomedin like 2Bprovided by Xenbase
Primary source
Xenbase:XB-GENE-960543
See related
Ensembl:ENSXETG00000004748 AllianceGenome:Xenbase:XB-GENE-960543
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Orthologous to human OLFML2B (olfactomedin like 2B). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See olfml2b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (118857088..118914062, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (108482151..108529810, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene selectin L Neighboring gene activating transcription factor 6 Neighboring gene retinoid X receptor gamma Neighboring gene discoidin domain receptor tyrosine kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
olfactomedin-like protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    118857088..118914062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004913779.4 → XP_004913836.2  olfactomedin-like protein 2B isoform X2

    UniProtKB/TrEMBL
    A0A8J0R0Q1
    Conserved Domains (1) summary
    pfam02191
    Location:510 → 758
    OLF; Olfactomedin-like domain

  2. XM_002933779.5 → XP_002933825.3  olfactomedin-like protein 2B isoform X1

    UniProtKB/TrEMBL
    F6ZPU8
    Related
    ENSXETP00000010289.5, ENSXETT00000010289.5
    Conserved Domains (1) summary
    pfam02191
    Location:511 → 759
    OLF; Olfactomedin-like domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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