U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ccl20 C-C motif chemokine ligand 20 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100494617, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
ccl20provided by Xenbase
Official Full Name
C-C motif chemokine ligand 20provided by Xenbase
Primary source
Xenbase:XB-GENE-12442262
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ckb4; larc; st38; mip3a; mip-3a; scya20
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (132629444..132654106, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (128656394..128661543, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene protein kinase C theta type-like Neighboring gene C-C motif chemokine 20 Neighboring gene eotaxin-like Neighboring gene C-C motif chemokine 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
  
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within chemotaxis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within immune response IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
C-C motif chemokine 20
Names
chemokine (C-C motif) ligand 20

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    132629444..132654106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018094474.2 → XP_017949963.1  C-C motif chemokine 20

    UniProtKB/TrEMBL
    A0A8J0T1A8
    Conserved Domains (1) summary
    cl00134
    Location:29 → 80
    Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials