ston1 stonin 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: ston1provided by Xenbase
Official Full Name: stonin 1provided by Xenbase
Primary source: Xenbase:XB-GENE-6050678
See related: Ensembl:ENSXETG00000034496 AllianceGenome:Xenbase:XB-GENE-6050678
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: sblf; stn1; stnb1; stoned-b1
Summary: Predicted to act upstream of or within endocytosis and regulation of endocytosis. Predicted to be located in cytoplasm. Orthologous to human STON1-GTF2A1L (STON1-GTF2A1L readthrough) and STON1 (stonin 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	5	NC_030681.2 (21275008..21323624)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	5	NC_030681.1 (17301237..17347365)

Chromosome 5 - NC_030681.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within endocytosis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of endocytosis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: stonin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001204867.2 → NP_001191796.2 stonin-1

Status: VALIDATED

Source sequence(s)

AAMC03017977, AAMC03017978

UniProtKB/TrEMBL

A0A6I8RV46, A0A8J0QEJ0

Related

ENSXETP00000085106.2, ENSXETT00000098701.2

Conserved Domains (1) summary

cl10970
Location:385 → 695

AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)