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pask PAS domain containing serine/threonine kinase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100488299, updated on 4-Nov-2024

Summary

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Official Symbol
paskprovided by Xenbase
Official Full Name
PAS domain containing serine/threonine kinaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-950862
See related
Ensembl:ENSXETG00000032412 AllianceGenome:Xenbase:XB-GENE-950862
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See pask in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (125954009..125977376)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (122388702..122411051)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene high density lipoprotein binding protein (vigilin) Neighboring gene protein phosphatase 1 regulatory subunit 7 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 like Neighboring gene mitochondrial transcription termination factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PAS domain-containing serine/threonine-protein kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    125954009..125977376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031902547.1 → XP_031758407.1  PAS domain-containing serine/threonine-protein kinase isoform X1

    UniProtKB/TrEMBL
    A0A6I8Q2B9, A0A6I8RU92
    Related
    ENSXETP00000084128.2, ENSXETT00000083556.2
    Conserved Domains (2) summary
    cd00130
    Location:116 → 206
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    cl21453
    Location:899 → 1153
    PKc_like; Protein Kinases, catalytic domain

  2. XM_031902548.1 → XP_031758408.1  PAS domain-containing serine/threonine-protein kinase isoform X2

    UniProtKB/TrEMBL
    A0A6I8PWH1, A0A6I8Q2B9
    Related
    ENSXETP00000060016.2, ENSXETT00000063137.3
    Conserved Domains (2) summary
    cd00130
    Location:105 → 195
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    cl21453
    Location:888 → 1142
    PKc_like; Protein Kinases, catalytic domain

  3. XM_004917791.4 → XP_004917848.1  PAS domain-containing serine/threonine-protein kinase isoform X2

    UniProtKB/TrEMBL
    A0A6I8PWH1, A0A6I8Q2B9
    Conserved Domains (2) summary
    cd00130
    Location:105 → 195
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    cl21453
    Location:888 → 1142
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein Strain
Heading Accession and Version

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