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ccdc141 coiled-coil domain containing 141 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485826, updated on 8-Mar-2024

Summary

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Official Symbol
ccdc141provided by Xenbase
Official Full Name
coiled-coil domain containing 141provided by Xenbase
Primary source
Xenbase:XB-GENE-6462926
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See ccdc141 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
23
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (63680581..63774420)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (58620741..58716541)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase N2-like Neighboring gene SEC14 and spectrin domain containing 1 Neighboring gene muscle M-line assembly protein unc-89 Neighboring gene titin Neighboring gene pleckstrin homology domain containing A3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
coiled-coil domain-containing protein 141

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    63680581..63774420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935686.5 → XP_002935732.3  coiled-coil domain-containing protein 141

    UniProtKB/TrEMBL
    A0A8J0QRC0
    Conserved Domains (4) summary
    COG1196
    Location:208 → 1013
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00176
    Location:133 → 357
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cd00096
    Location:1370 → 1372
    Ig; Ig strand A [structural motif]
    cl11960
    Location:1370 → 1449
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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