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hoxa10 homeobox A10 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485262, updated on 4-Nov-2024

Summary

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Official Symbol
hoxa10provided by Xenbase
Official Full Name
homeobox A10provided by Xenbase
Primary source
Xenbase:XB-GENE-478888
See related
AllianceGenome:Xenbase:XB-GENE-478888
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
hoxa11; Xhoxa11; hoxa-11
Orthologs
human mouse all
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Genomic context

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See hoxa10 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (42207684..42211840, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (32891661..32895810)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene homeobox A3 Neighboring gene uncharacterized LOC116411597 Neighboring gene homeobox A7 Neighboring gene homeobox A9 Neighboring gene microRNA mir-196b Neighboring gene homeobox A11 Neighboring gene homeobox A13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of Hoxa-11 in lineages phylogenetically positioned along the fin-limb transition. Chiu CH, et al. Mol Phylogenet Evol, 2000 Nov. PMID 11083943
  2. Anterior migration of lateral plate mesodermal cells during embryogenesis of the pufferfish Takifugu niphobles: insight into the rostral positioning of pelvic fins. Tanaka M, et al. J Anat, 2015 Jul. PMID 26018586, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
homeobox A11; homeobox protein Hox-A10
Names
homeobox protein Hox A11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    42207684..42211840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002933394.5 → XP_002933440.2  homeobox protein Hox-A10

    UniProtKB/TrEMBL
    A0A8J0QIT0
    Conserved Domains (1) summary
    pfam00046
    Location:288 → 342
    Homeobox; Homeobox domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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