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tafa3 TAFA chemokine like family member 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100380203, updated on 4-Nov-2024

Summary

Official Symbol
tafa3provided by Xenbase
Official Full Name
TAFA chemokine like family member 3provided by Xenbase
Primary source
Xenbase:XB-GENE-981196
See related
Ensembl:ENSXETG00000040547 AllianceGenome:Xenbase:XB-GENE-981196
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
tafa-3; fam19a3
Orthologs
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Genomic context

See tafa3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (61788901..61979624, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (75111981..75281628, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 1 Neighboring gene uncharacterized LOC116408684 Neighboring gene leucine-rich repeats and immunoglobulin like domains 2 Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 3

Genomic regions, transcripts, and products

General protein information

Preferred Names
chemokine-like protein TAFA-3
Names
family with sequence similarity 19 (chemokine (C-C motif)-like), member A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    61788901..61979624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031896814.1XP_031752674.1  chemokine-like protein TAFA-3 isoform X2

    UniProtKB/TrEMBL
    A0A6I8S328, A0A803JFQ9
    Related
    ENSXETP00000091253.2, ENSXETT00000075085.2
    Conserved Domains (1) summary
    pfam12020
    Location:44131
    TAFA; TAFA family
  2. XM_031896813.1XP_031752673.1  chemokine-like protein TAFA-3 isoform X1

    UniProtKB/TrEMBL
    A0A803JFQ9, A0A803JWD8
    Conserved Domains (1) summary
    pfam12020
    Location:44131
    TAFA; TAFA family
  3. XM_031896812.1XP_031752672.1  chemokine-like protein TAFA-3 isoform X1

    UniProtKB/TrEMBL
    A0A803JFQ9, A0A803JWD8
    Related
    ENSXETP00000112362.1, ENSXETT00000116816.1
    Conserved Domains (1) summary
    pfam12020
    Location:44131
    TAFA; TAFA family