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mia3 MIA SH3 domain ER export factor 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100379945, updated on 17-Aug-2024

Summary

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Official Symbol
mia3provided by Xenbase
Official Full Name
MIA SH3 domain ER export factor 3provided by Xenbase
Primary source
Xenbase:XB-GENE-5897283
See related
Ensembl:ENSXETG00000040444
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
arnt; d320; tango; tango1; unq6077
Orthologs
human mouse all
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Genomic context

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See mia3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
31
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (9619203..9671133, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (5928905..5980853, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene BRO1 domain and CAAX motif containing Neighboring gene axin interactor, dorsalization associated Neighboring gene TATA-box binding protein associated factor, RNA polymerase I, A Neighboring gene HHIP-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transport and Golgi organization protein 1 homolog
Names
melanoma inhibitory activity family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    9619203..9671133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004914795.4 → XP_004914852.2  transport and Golgi organization protein 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A6I8RM87
    Related
    ENSXETP00000081815.2, ENSXETT00000069253.2
    Conserved Domains (5) summary
    PHA03247
    Location:2428 → 2853
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:1439 → 1882
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    pfam02463
    Location:1459 → 2387
    SMC_N; RecF/RecN/SMC N terminal domain
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  2. XM_031902233.1 → XP_031758093.1  transport and Golgi organization protein 1 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8J1JJP9
    Conserved Domains (5) summary
    PHA03247
    Location:2412 → 2837
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:1445 → 1866
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    pfam02463
    Location:1478 → 2371
    SMC_N; RecF/RecN/SMC N terminal domain
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  3. XM_031902236.1 → XP_031758096.1  transport and Golgi organization protein 1 homolog isoform X8

    UniProtKB/TrEMBL
    A0A8J1JNB2
    Conserved Domains (4) summary
    PHA03247
    Location:2312 → 2737
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:505 → 971
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam02463
    Location:1455 → 2271
    SMC_N; RecF/RecN/SMC N terminal domain
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  4. XM_031902235.1 → XP_031758095.1  transport and Golgi organization protein 1 homolog isoform X7

    UniProtKB/TrEMBL
    A0A8J1JM41
    Conserved Domains (5) summary
    PHA03247
    Location:2388 → 2813
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:1969 → 2338
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:1439 → 1826
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  5. XM_031902230.1 → XP_031758090.1  transport and Golgi organization protein 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1JM37
    Conserved Domains (5) summary
    PHA03247
    Location:2416 → 2841
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:1997 → 2366
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:1439 → 1946
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  6. XM_031902240.1 → XP_031758100.1  transport and Golgi organization protein 1 homolog isoform X12

    UniProtKB/TrEMBL
    A0A8J1JM47
    Conserved Domains (6) summary
    PHA03247
    Location:2203 → 2629
    PHA03247; large tegument protein UL36; Provisional
    COG0419
    Location:1772 → 2204
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG1196
    Location:1341 → 2166
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:505 → 971
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  7. XM_031902238.1 → XP_031758098.1  transport and Golgi organization protein 1 homolog isoform X10

    UniProtKB/TrEMBL
    A0A8J1JJQ4
    Conserved Domains (5) summary
    PHA03247
    Location:2292 → 2717
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:1873 → 2242
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:505 → 971
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  8. XM_031902239.1 → XP_031758099.1  transport and Golgi organization protein 1 homolog isoform X11

    UniProtKB/TrEMBL
    A0A8J1JJQ1
    Conserved Domains (4) summary
    PHA03247
    Location:2235 → 2661
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:1817 → 2186
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:505 → 971
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  9. XM_031902237.1 → XP_031758097.1  transport and Golgi organization protein 1 homolog isoform X9

    UniProtKB/TrEMBL
    A0A8J1JJQ3
    Conserved Domains (5) summary
    PHA03247
    Location:2300 → 2725
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:1881 → 2250
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:1439 → 1812
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam02463
    Location:1059 → 1725
    SMC_N; RecF/RecN/SMC N terminal domain
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  10. XM_031902232.1 → XP_031758092.1  transport and Golgi organization protein 1 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8J1JJP8
    Conserved Domains (5) summary
    PHA03247
    Location:2412 → 2837
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:1993 → 2362
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:1439 → 1942
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  11. XM_031902231.1 → XP_031758091.1  transport and Golgi organization protein 1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8J1JNA6
    Conserved Domains (5) summary
    PTZ00121
    Location:869 → 1743
    PTZ00121; MAEBL; Provisional
    PHA03247
    Location:2412 → 2837
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:1439 → 1837
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam02463
    Location:1459 → 2371
    SMC_N; RecF/RecN/SMC N terminal domain
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  12. XM_002940698.5 → XP_002940744.3  transport and Golgi organization protein 1 homolog isoform X6

    UniProtKB/TrEMBL
    A0A6I8R886
    Related
    ENSXETP00000078132.2, ENSXETT00000077808.2
    Conserved Domains (5) summary
    PHA03247
    Location:2428 → 2829
    PHA03247; large tegument protein UL36; Provisional
    COG5271
    Location:1439 → 1882
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    pfam02463
    Location:1459 → 2387
    SMC_N; RecF/RecN/SMC N terminal domain
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  13. XM_012963969.3 → XP_012819423.2  transport and Golgi organization protein 1 homolog isoform X14

    UniProtKB/TrEMBL
    A0A8J0SPW2
    Conserved Domains (5) summary
    TIGR01612
    Location:857 → 1971
    235kDa-fam; reticulocyte binding/rhoptry protein
    PHA03247
    Location:1980 → 2406
    PHA03247; large tegument protein UL36; Provisional
    COG0419
    Location:1549 → 1981
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    COG5271
    Location:505 → 971
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily

  14. XM_031902241.1 → XP_031758101.1  transport and Golgi organization protein 1 homolog isoform X13

    UniProtKB/TrEMBL
    A0A8J1JNB8
    Conserved Domains (5) summary
    COG1196
    Location:2009 → 2378
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:1439 → 1866
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK08581
    Location:1074 → 1318
    PRK08581; amidase domain-containing protein
    PRK11637
    Location:2314 → 2463
    PRK11637; AmiB activator; Provisional
    cl17036
    Location:33 → 105
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein Strain
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