Cd1b3 CD1b3 molecule [Cavia porcellus (domestic guinea pig)] - Gene

Summary

Gene symbol: Cd1b3
Gene description: CD1b3 molecule
See related: Ensembl:ENSCPOG00000038297
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Cavia porcellus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as: CD1-b3
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Genomic context

Location:: chromosome: Un

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	mCavPor4.1 (GCF_034190915.1)	Unplaced Scaffold	NW_026947490.1 (45421775..45426041)
103	previous assembly	Cavpor3.0 (GCF_000151735.1)	Unplaced Scaffold	NT_176363.1 (7396874..7400515)

NW_026947490.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables endogenous lipid antigen binding	IEA Inferred from Electronic Annotation more info	PubMed
enables exogenous lipid antigen binding	IEA Inferred from Electronic Annotation more info	PubMed
enables lipopeptide binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in antigen processing and presentation, endogenous lipid antigen via MHC class Ib	IEA Inferred from Electronic Annotation more info	PubMed
involved_in antigen processing and presentation, exogenous lipid antigen via MHC class Ib	IEA Inferred from Electronic Annotation more info	PubMed
involved_in immune response	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of T cell mediated cytotoxicity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in external side of plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: T-cell surface glycoprotein CD1b3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001172851.1 → NP_001166322.1 T-cell surface glycoprotein CD1b3 precursor

See identical proteins and their annotated locations for NP_001166322.1

Status: PROVISIONAL

Source sequence(s)

AF145485

UniProtKB/Swiss-Prot

Q9QZZ0

UniProtKB/TrEMBL

H0WBB2

Related

ENSCPOP00000020278.2, ENSCPOT00000027180.2

Conserved Domains (2) summary

cd07698
Location:203 → 295

IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain

cl08246
Location:20 → 198

MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2