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Fabp5 fatty acid binding protein 5 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100337640, updated on 8-Mar-2024

Summary

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Gene symbol
Fabp5
Gene description
fatty acid binding protein 5
See related
Ensembl:ENSCPOG00000039055
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
E-FABP
Orthologs
human mouse all
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Genomic context

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See Fabp5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947493.1 (56324430..56328559)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176419.1 (32608413..32612534, complement)

NW_026947493.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 704 Neighboring gene phosphoprotein membrane anchor with glycosphingolipid microdomains 1 Neighboring gene uncharacterized LOC106025857 Neighboring gene myelin P2 protein Neighboring gene fatty acid-binding protein 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expressed sequence tag analysis of guinea pig (Cavia porcellus) eye tissues for NEIBank. Simpanya MF, et al. Mol Vis, 2008. PMID 19104676, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid-binding protein 5
Names
fatty acid binding protein 5 (psoriasis-associated)
fatty acid binding protein 5, epidermal
fatty acid-binding protein, epidermal

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001173092.1 → NP_001166563.1  fatty acid-binding protein 5

    See identical proteins and their annotated locations for NP_001166563.1

    Status: PROVISIONAL

    Source sequence(s)
    EU264005
    UniProtKB/TrEMBL
    A9QUC5
    Related
    ENSCPOP00000025816.1, ENSCPOT00000039172.1
    Conserved Domains (1) summary
    pfam00061
    Location:8 → 134
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947493.1 Reference mCavPor4.1

    Range
    56324430..56328559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023561628.2 → XP_023417396.1  fatty acid-binding protein 5 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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