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LOC100330644 lysine-specific demethylase 9 [ Danio rerio (zebrafish) ]

Gene ID: 100330644, updated on 12-Sep-2024

Summary

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Gene symbol
LOC100330644
Gene description
lysine-specific demethylase 9
See related
Ensembl:ENSDARG00000098968
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC100330644 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (26181100..26228102, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (26255876..26301667, complement)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489130 Neighboring gene regulator of complement activation group 2 gene 2 Neighboring gene protein tyrosine phosphatase non-receptor type 22 Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 3a Neighboring gene si:ch73-206d17.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
lysine-specific demethylase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    26181100..26228102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021469974.2 → XP_021325649.2  lysine-specific demethylase 9

    Related
    ENSDARP00000136548.1, ENSDART00000162423.2
Nucleotide Protein
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