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LOC100305877 DNA-binding protein S1FA [ Glycine max (soybean) ]

Gene ID: 100305877, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100305877
Gene description
DNA-binding protein S1FA
Locus tag
GLYMA_19G179700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100305877 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 19 NC_038255.2 (44302555..44304278, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 19 NC_038255.1 (43860611..43862275, complement)

Chromosome 19 - NC_038255.2Genomic Context describing neighboring genes Neighboring gene cell number regulator 8 Neighboring gene DNA-directed RNA polymerase I subunit RPA12-like Neighboring gene uncharacterized LOC100786645 Neighboring gene MLO-like protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein S1FA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038255.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    44302555..44304278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003554319.5 → XP_003554367.1  DNA-binding protein S1FA

    See identical proteins and their annotated locations for XP_003554367.1

    UniProtKB/TrEMBL
    C6SX03
    Conserved Domains (1) summary
    pfam04689
    Location:24 → 89
    S1FA; DNA binding protein S1FA
Nucleotide Protein
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