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C4orf46P4 C4orf46 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100288558, updated on 17-Sep-2024

Summary

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Official Symbol
C4orf46P4provided by HGNC
Official Full Name
C4orf46 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:55885
See related
AllianceGenome:HGNC:55885
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See C4orf46P4 in Genome Data Viewer
Location:
6q24.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (143388912..143389546)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (144581317..144581951)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (143710049..143710683)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene androgen induced 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:143654104-143655303 Neighboring gene ribosomal protein L31 pseudogene 27 Neighboring gene PARL pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25197 Neighboring gene uncharacterized LOC107986656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25198 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:143770838-143771820 Neighboring gene RNA, 5S ribosomal pseudogene 221 Neighboring gene adenosine deaminase tRNA specific 2 Neighboring gene tubulin beta 8 class VIII pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022374.3 

    Range
    92..726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    143388912..143389546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    144581317..144581951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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