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LOC100265943 protein tesmin/TSO1-like CXC 2 [ Vitis vinifera (wine grape) ]

Gene ID: 100265943, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100265943
Gene description
protein tesmin/TSO1-like CXC 2
Locus tag
VIT_00021837001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100265943 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 14 NC_081818.1 (6671529..6677934)
102 previous assembly 12X (GCF_000003745.3) 14 NC_012020.3 (6670837..6677250)

Chromosome 14 - NC_081818.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100267457 Neighboring gene protein NDL2 Neighboring gene small ribosomal subunit protein eS1y-like Neighboring gene uncharacterized LOC100252065

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CRC domain-containing protein TSO1; protein tesmin/TSO1-like CXC 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081818.1 Reference ASM3070453v1 Primary Assembly

    Range
    6671529..6677934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010661598.3 → XP_010659900.1  CRC domain-containing protein TSO1 isoform X2

    UniProtKB/TrEMBL
    A5C957
    Conserved Domains (1) summary
    pfam03638
    Location:498 → 535
    TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain

  2. XM_010661599.3 → XP_010659901.1  protein tesmin/TSO1-like CXC 2 isoform X3

    UniProtKB/TrEMBL
    A5C957
    Conserved Domains (1) summary
    pfam03638
    Location:497 → 534
    TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain

  3. XM_010661597.3 → XP_010659899.1  CRC domain-containing protein TSO1 isoform X1

    UniProtKB/TrEMBL
    A5C957, F6HTT3
    Conserved Domains (1) summary
    pfam03638
    Location:502 → 539
    TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain
Nucleotide Protein
Heading Accession and Version

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