U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100262194 probable WRKY transcription factor 32 [ Vitis vinifera (wine grape) ]

Gene ID: 100262194, updated on 23-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100262194
Gene description
probable WRKY transcription factor 32
Locus tag
VIT_00023600001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100262194 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 11 NC_081815.1 (8014750..8022795)
102 previous assembly 12X (GCF_000003745.3) 11 NC_012017.3 (7837624..7845668)

Chromosome 11 - NC_081815.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100253512 Neighboring gene uncharacterized LOC132254619 Neighboring gene FIP1[V]-like protein Neighboring gene ABC transporter I family member 1-like Neighboring gene uncharacterized LOC100267363 Neighboring gene uncharacterized LOC100258659

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
  2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable WRKY transcription factor 32

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081815.1 Reference ASM3070453v1 Primary Assembly

    Range
    8014750..8022795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010658303.3 → XP_010656605.1  probable WRKY transcription factor 32 isoform X1

    Conserved Domains (1) summary
    smart00774
    Location:363 → 418
    WRKY; DNA binding domain

  2. XM_002276158.5 → XP_002276194.1  probable WRKY transcription factor 32 isoform X2

    See identical proteins and their annotated locations for XP_002276194.1

    UniProtKB/TrEMBL
    D7U1A8
    Conserved Domains (1) summary
    smart00774
    Location:362 → 417
    WRKY; DNA binding domain

  3. XM_019223018.2 → XP_019078563.1  probable WRKY transcription factor 32 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials