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LOC100252176 MYB-like transcription factor ETC3 [ Vitis vinifera (wine grape) ]

Gene ID: 100252176, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100252176
Gene description
MYB-like transcription factor ETC3
Locus tag
VIT_00012725001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100252176 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 10 NC_081814.1 (1137051..1137706)
102 previous assembly 12X (GCF_000003745.3) 10 NC_012016.3 (1034235..1034883)

Chromosome 10 - NC_081814.1Genomic Context describing neighboring genes Neighboring gene ATP synthase gamma chain, chloroplastic Neighboring gene uncharacterized LOC100247051 Neighboring gene tRNA wybutosine-synthesizing protein 2/3/4 Neighboring gene peroxidase 42-like Neighboring gene uncharacterized LOC104880466

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MYB-like transcription factor ETC1; MYB-like transcription factor ETC3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081814.1 Reference ASM3070453v1 Primary Assembly

    Range
    1137051..1137706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059740292.1 → XP_059596275.1  MYB-like transcription factor ETC1 isoform X1

  2. XM_010657094.2 → XP_010655396.1  MYB-like transcription factor ETC3 isoform X2

    See identical proteins and their annotated locations for XP_010655396.1

    UniProtKB/TrEMBL
    A0A438EDZ0, A0A438JG12, E0CVT1
    Conserved Domains (1) summary
    PLN03212
    Location:36 → 73
    PLN03212; Transcription repressor MYB5; Provisional
Nucleotide Protein
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