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LOC100249478 NAC domain-containing protein 90 [ Vitis vinifera (wine grape) ]

Gene ID: 100249478, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100249478
Gene description
NAC domain-containing protein 90
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100249478 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 8 NC_081812.1 (18201035..18203042, complement)
102 previous assembly 12X (GCF_000003745.3) 8 NC_012014.3 (17020341..17022344, complement)

Chromosome 8 - NC_081812.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein LWD1 Neighboring gene vacuolar protein sorting-associated protein 55 homolog Neighboring gene protein S40-7 Neighboring gene small nucleolar RNA Z266 Neighboring gene sorting nexin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 90

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081812.1 Reference ASM3070453v1 Primary Assembly

    Range
    18201035..18203042 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002276156.4 → XP_002276192.1  NAC domain-containing protein 90

    UniProtKB/TrEMBL
    A5BT04, F6HKN2
    Conserved Domains (1) summary
    pfam02365
    Location:5 → 138
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
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