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lpar5 lysophosphatidic acid receptor 5 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100216171, updated on 17-Aug-2024

Summary

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Official Symbol
lpar5provided by Xenbase
Official Full Name
lysophosphatidic acid receptor 5provided by Xenbase
Primary source
Xenbase:XB-GENE-996077
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
lpa5
Orthologs
human mouse all
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Genomic context

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See lpar5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (10108483..10115919, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (1785231..1791107, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene NOP2 nucleolar protein Neighboring gene small Cajal body-specific RNA 11 Neighboring gene chromodomain helicase DNA binding protein 4 Neighboring gene TAP binding protein like Neighboring gene lymphotoxin beta receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
LOW QUALITY PROTEIN: lysophosphatidic acid receptor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    10108483..10115919 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031905768.1 → XP_031761628.1  LOW QUALITY PROTEIN: lysophosphatidic acid receptor 5

    UniProtKB/TrEMBL
    A0A8J1JUS1, B5DDW7
    Conserved Domains (1) summary
    cd15154
    Location:224 → 503
    7tmA_LPAR5; lysophosphatidic acid receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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