U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

abcc10 ATP binding cassette subfamily C member 10 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100216149, updated on 4-Nov-2024

Summary

Official Symbol
abcc10provided by Xenbase
Official Full Name
ATP binding cassette subfamily C member 10provided by Xenbase
Primary source
Xenbase:XB-GENE-6465377
See related
Ensembl:ENSXETG00000010586 AllianceGenome:Xenbase:XB-GENE-6465377
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
mrp7; simrp7
Summary
Predicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Orthologous to human ABCC10 (ATP binding cassette subfamily C member 10). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See abcc10 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
22
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (2704458..2736270, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683761.1 (11267..37428, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene tight junction associated protein 1 (peripheral) Neighboring gene delta-like 2 homolog Neighboring gene zinc finger protein 318 Neighboring gene cysteine-rich protein 3

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ATP-binding cassette sub-family C member 10
Names
ATP-binding cassette, sub-family C (CFTR/MRP), member 10
NP_001135594.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001142122.1NP_001135594.1  ATP-binding cassette sub-family C member 10

    See identical proteins and their annotated locations for NP_001135594.1

    Status: PROVISIONAL

    Source sequence(s)
    BC168122
    UniProtKB/TrEMBL
    B4F741, F6W7X4
    Related
    ENSXETP00000023220.5, ENSXETT00000023220.5
    Conserved Domains (1) summary
    TIGR00957
    Location:1801484
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    2704458..2736270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001923682.2 RNA Sequence