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cpz carboxypeptidase Z [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100170588, updated on 17-Aug-2024

Summary

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Official Symbol
cpzprovided by Xenbase
Official Full Name
carboxypeptidase Zprovided by Xenbase
Primary source
Xenbase:XB-GENE-994183
See related
Ensembl:ENSXETG00000015417
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See cpz in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (23786344..23835730, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683394.1 (431328..480803, complement)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene H6 family homeobox 1 Neighboring gene sensory organ homeobox 1 Neighboring gene uncharacterized LOC116408437 Neighboring gene G protein-coupled receptor 78 Neighboring gene uncharacterized LOC105946260

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
carboxypeptidase Z

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130361.1 → NP_001123833.1  carboxypeptidase Z

    See identical proteins and their annotated locations for NP_001123833.1

    Status: PROVISIONAL

    Source sequence(s)
    BC167656
    UniProtKB/TrEMBL
    B3DM09
    Conserved Domains (3) summary
    cd03867
    Location:51 → 365
    M14_CPZ; Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup
    cd11308
    Location:369 → 445
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl02447
    Location:1 → 28
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    23786344..23835730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012957091.3 → XP_012812545.1  carboxypeptidase Z isoform X2

    UniProtKB/TrEMBL
    F6WCK3
    Related
    ENSXETP00000033654.5, ENSXETT00000033654.5
    Conserved Domains (3) summary
    cd03867
    Location:182 → 496
    M14_CPZ; Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup
    cd11308
    Location:500 → 576
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl02447
    Location:36 → 159
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain

  2. XM_012957083.3 → XP_012812537.1  carboxypeptidase Z isoform X1

    UniProtKB/TrEMBL
    A0A1B8Y8J4
    Related
    ENSXETP00000069065.1, ENSXETT00000100332.2
    Conserved Domains (3) summary
    cd11308
    Location:510 → 586
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cd03867
    Location:192 → 506
    M14_CPZ; Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup
    cl02447
    Location:46 → 169
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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