U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mdfic MyoD family inhibitor domain containing [ Danio rerio (zebrafish) ]

Gene ID: 100150512, updated on 2-Nov-2024

Summary

Official Symbol
mdficprovided by ZNC
Official Full Name
MyoD family inhibitor domain containingprovided by ZNC
Primary source
ZFIN:ZDB-GENE-070705-162
See related
Ensembl:ENSDARG00000074223 AllianceGenome:ZFIN:ZDB-GENE-070705-162
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-262n1.4
Summary
Human ortholog(s) of this gene implicated in hereditary lymphedema. Orthologous to human MDFIC (MyoD family inhibitor domain containing). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See mdfic in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (6344211..6373735, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (6335641..6365165, complement)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101885859 Neighboring gene transcription factor EC Neighboring gene uncharacterized LOC101885896 Neighboring gene si:ch211-262n1.5 Neighboring gene forkhead box P2 Neighboring gene uncharacterized LOC137490067

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
myoD family inhibitor domain-containing protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001328013.1NP_001314942.1  myoD family inhibitor domain-containing protein

    Status: VALIDATED

    Source sequence(s)
    CR356233, EH544741, EH586279, EH603714, FP003593
    UniProtKB/TrEMBL
    A0A8M1P9E2, F6NQ15
    Related
    ENSDARP00000118467.3, ENSDART00000140100.4
    Conserved Domains (1) summary
    pfam15316
    Location:78257
    MDFI; MyoD family inhibitor

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    6344211..6373735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)