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cdk18 cyclin dependent kinase 18 [ Danio rerio (zebrafish) ]

Gene ID: 100150007, updated on 2-Nov-2024

Summary

Official Symbol
cdk18provided by ZNC
Official Full Name
cyclin dependent kinase 18provided by ZNC
Primary source
ZFIN:ZDB-GENE-141215-51
See related
Ensembl:ENSDARG00000012204 AllianceGenome:ZFIN:ZDB-GENE-141215-51
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-166c18.1
Summary
Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human CDK18 (cyclin dependent kinase 18). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See cdk18 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (38280771..38421225)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (38013267..38154292)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496729 Neighboring gene BLACAT1 overlapping LEMD1 locus Neighboring gene microRNA 135c-1 Neighboring gene major facilitator superfamily domain containing 4Aa Neighboring gene ETS transcription factor ELK4

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    38280771..38421225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001919300.7XP_001919335.2  cyclin-dependent kinase 18

    UniProtKB/TrEMBL
    A0A8M1QH83, E7F9R5
    Related
    ENSDARP00000137603.1, ENSDART00000171496.3
    Conserved Domains (2) summary
    PLN00009
    Location:132420
    PLN00009; cyclin-dependent kinase A; Provisional
    cd07871
    Location:129416
    STKc_PCTAIRE3; Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase