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aggf1 angiogenic factor with G-patch and FHA domains 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145680, updated on 17-Aug-2024

Summary

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Official Symbol
aggf1provided by Xenbase
Official Full Name
angiogenic factor with G-patch and FHA domains 1provided by Xenbase
Primary source
Xenbase:XB-GENE-6052300
See related
Ensembl:ENSXETG00000017077
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See aggf1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (185009875..185026625, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (164805348..164821866)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA47 Neighboring gene S100 calcium binding protein Z Neighboring gene phosphodiesterase 8B Neighboring gene WD repeat domain 41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
angiogenic factor with G patch and FHA domains 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    185009875..185026625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031893880.1 → XP_031749740.1  angiogenic factor with G patch and FHA domains 1 isoform X2

    UniProtKB/TrEMBL
    A0A8J1IYA1
    Conserved Domains (4) summary
    COG4191
    Location:14 → 138
    COG4191; Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
    cd00060
    Location:405 → 510
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:225 → 278
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    pfam01585
    Location:614 → 656
    G-patch; G-patch domain

  2. XM_031893892.1 → XP_031749752.1  angiogenic factor with G patch and FHA domains 1 isoform X4

    UniProtKB/TrEMBL
    A0A8J1IVX9
    Conserved Domains (4) summary
    COG4191
    Location:14 → 138
    COG4191; Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
    cd00060
    Location:349 → 454
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:225 → 278
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    pfam01585
    Location:558 → 600
    G-patch; G-patch domain

  3. XM_012967381.3 → XP_012822835.1  angiogenic factor with G patch and FHA domains 1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8PU18
    Related
    ENSXETP00000063994.2, ENSXETT00000061631.3
    Conserved Domains (4) summary
    COG4191
    Location:14 → 138
    COG4191; Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
    cd00060
    Location:407 → 512
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:225 → 278
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    pfam01585
    Location:616 → 657
    G-patch; G-patch domain

  4. XM_012967387.3 → XP_012822841.1  angiogenic factor with G patch and FHA domains 1 isoform X3

    UniProtKB/TrEMBL
    A0A8J0SRN7
    Conserved Domains (4) summary
    COG4191
    Location:14 → 138
    COG4191; Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
    cd00060
    Location:351 → 456
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd16164
    Location:225 → 278
    OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    pfam01585
    Location:560 → 601
    G-patch; G-patch domain
Nucleotide Protein Strain
Heading Accession and Version

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