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fhl2 four and a half LIM domains 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145283, updated on 4-Nov-2024

Summary

Official Symbol
fhl2provided by Xenbase
Official Full Name
four and a half LIM domains 2provided by Xenbase
Primary source
Xenbase:XB-GENE-969632
See related
Ensembl:ENSXETG00000002577 AllianceGenome:Xenbase:XB-GENE-969632
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable metal ion binding activity. Orthologous to human FHL2 (four and a half LIM domains 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fhl2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (111691026..111737103, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (108145271..108190435, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene transforming growth factor beta receptor associated protein 1 Neighboring gene chromosome 2 C2orf49 homolog Neighboring gene protein kinase C delta type Neighboring gene protein kinase C delta type

Genomic regions, transcripts, and products

General protein information

Preferred Names
four and a half LIM domains protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126761.1NP_001120233.1  four and a half LIM domains protein 2

    See identical proteins and their annotated locations for NP_001120233.1

    Status: PROVISIONAL

    Source sequence(s)
    BC160411
    UniProtKB/TrEMBL
    B1H0Z6, F7BDN1
    Related
    ENSXETP00000005493.3, ENSXETT00000005493.5
    Conserved Domains (5) summary
    cd09422
    Location:3697
    LIM1_FHL2; The first LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09426
    Location:101157
    LIM2_FHL2; The second LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09431
    Location:162218
    LIM3_Fhl2; The third LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09433
    Location:221278
    LIM4_FHL2; The fourth LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cl02475
    Location:533
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    111691026..111737103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031895685.1XP_031751545.1  four and a half LIM domains protein 2 isoform X1

    UniProtKB/TrEMBL
    B1H0Z6, F7BDN1
    Conserved Domains (5) summary
    cd09422
    Location:3697
    LIM1_FHL2; The first LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09426
    Location:101157
    LIM2_FHL2; The second LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09431
    Location:162218
    LIM3_Fhl2; The third LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09433
    Location:221278
    LIM4_FHL2; The fourth LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cl02475
    Location:533
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
  2. XM_012956473.3XP_012811927.1  four and a half LIM domains protein 2 isoform X1

    See identical proteins and their annotated locations for XP_012811927.1

    UniProtKB/TrEMBL
    B1H0Z6, F7BDN1
    Conserved Domains (5) summary
    cd09422
    Location:3697
    LIM1_FHL2; The first LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09426
    Location:101157
    LIM2_FHL2; The second LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09431
    Location:162218
    LIM3_Fhl2; The third LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cd09433
    Location:221278
    LIM4_FHL2; The fourth LIM domain of Four and a half LIM domains protein 2 (FHL2)
    cl02475
    Location:533
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers