wdr77 WD repeat domain 77 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: wdr77provided by Xenbase
Official Full Name: WD repeat domain 77provided by Xenbase
Primary source: Xenbase:XB-GENE-972898
See related: Ensembl:ENSXETG00000006758 AllianceGenome:Xenbase:XB-GENE-972898
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: mep50; valois
Summary: Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. Predicted to be located in cytoplasm. Orthologous to human WDR77 (WD repeat domain 77). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	2	NC_030678.2 (45260747..45272579, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	2	NC_030678.1 (40280995..40292463)

Chromosome 2 - NC_030678.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables alpha-(1->3)-fucosyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in fucosylation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: methylosome protein WDR77

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001126537.1 → NP_001120009.1 methylosome protein WDR77

See identical proteins and their annotated locations for NP_001120009.1

Status: PROVISIONAL

Source sequence(s)

BC158306

UniProtKB/TrEMBL

B0BM65, F6VKM5

Related

ENSXETP00000014773.5, ENSXETT00000014773.5

Conserved Domains (3) summary

COG2319
Location:43 → 312

WD40; WD40 repeat [General function prediction only]

sd00039
Location:73 → 110

7WD40; WD40 repeat [structural motif]

cl02567
Location:70 → 297

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...