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zmym2 zinc finger MYM-type containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100144668, updated on 4-Nov-2024

Summary

Official Symbol
zmym2provided by Xenbase
Official Full Name
zinc finger MYM-type containing 2provided by Xenbase
Primary source
Xenbase:XB-GENE-961591
See related
Ensembl:ENSXETG00000002643 AllianceGenome:Xenbase:XB-GENE-961591
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
fim; mym; ramp; scll; zfp198; znf198
Summary
Predicted to enable zinc ion binding activity. Acts upstream of or within pronephros development. Is expressed in ectoderm; nervous system; and pharyngeal arch. Orthologous to human ZMYM2 (zinc finger MYM-type containing 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See zmym2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (158750909..158763474)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (155650967..155663537)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 8 Neighboring gene paraspeckle component 1 Neighboring gene gap junction protein alpha 3 Neighboring gene gap junction protein beta 2

Genomic regions, transcripts, and products

General protein information

Preferred Names
zinc finger MYM-type protein 2
Names
zinc finger protein 198
zinc finger, MYM-type 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001123434.1NP_001116906.1  zinc finger MYM-type protein 2

    See identical proteins and their annotated locations for NP_001116906.1

    Status: PROVISIONAL

    Source sequence(s)
    BC160393
    UniProtKB/TrEMBL
    A0A7D9NMH9, B1H0Y1
    Related
    ENSXETP00000005674.3, ENSXETT00000005674.5
    Conserved Domains (1) summary
    pfam06467
    Location:437480
    zf-FCS; MYM-type Zinc finger with FCS sequence motif

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    158750909..158763474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)