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fnta farnesyltransferase, CAAX box, subunit alpha [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100144648, updated on 18-Sep-2024

Summary

Official Symbol
fntaprovided by Xenbase
Official Full Name
farnesyltransferase, CAAX box, subunit alphaprovided by Xenbase
Primary source
Xenbase:XB-GENE-489936
See related
Ensembl:ENSXETG00000004459
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
fpta; ptar2; pggt1a; FTase-alpha
Orthologs
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Genomic context

See fnta in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (96003631..96021180)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (77051701..77067304)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene protein kinase cGMP-dependent 2 Neighboring gene thymosin beta 10 Neighboring gene protein-O-mannose kinase Neighboring gene heparan-alpha-glucosaminide N-acetyltransferase

Genomic regions, transcripts, and products

General protein information

Preferred Names
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Names
farnesyltransferase, CAAX box, alpha
NP_001116893.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001123421.1NP_001116893.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

    See identical proteins and their annotated locations for NP_001116893.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161530
    UniProtKB/TrEMBL
    A0A6I8R2V6, B1WAX0, F7E5Z4
    Related
    ENSXETP00000076286.2, ENSXETT00000098931.2
    Conserved Domains (1) summary
    PLN02789
    Location:59351
    PLN02789; farnesyltranstransferase

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    96003631..96021180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)