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KIAA0232 KIAA0232 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100135166, updated on 4-Nov-2024

Summary

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Official Symbol
KIAA0232provided by Xenbase
Official Full Name
KIAA0232provided by Xenbase
Primary source
Xenbase:XB-GENE-5888041
See related
Ensembl:ENSXETG00000022909 AllianceGenome:Xenbase:XB-GENE-5888041
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to enable ABC-type oligopeptide transporter activity. Predicted to be involved in oligopeptide export from mitochondrion. Predicted to be active in mitochondrial inner membrane. Orthologous to human KIAA0232 (KIAA0232). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See KIAA0232 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (24426772..24456309)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (20450284..20479821, complement)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein P Neighboring gene ADP-dependent glucokinase like Neighboring gene TBC1 domain family member 14 Neighboring gene cilia and flagella associated protein 184

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ABC-type oligopeptide transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in oligopeptide export from mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein KIAA0232 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    24426772..24456309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002938259.5 → XP_002938305.1  uncharacterized protein KIAA0232 homolog

    See identical proteins and their annotated locations for XP_002938305.1

    UniProtKB/TrEMBL
    A0A803JQ72, F7DTJ5
    Related
    ENSXETP00000049531.4, ENSXETT00000049531.5
    Conserved Domains (1) summary
    pfam15376
    Location:22 → 1275
    DUF4603; Domain of unknown function (DUF4603)

  2. XM_004911254.4 → XP_004911311.1  uncharacterized protein KIAA0232 homolog

    See identical proteins and their annotated locations for XP_004911311.1

    UniProtKB/TrEMBL
    A0A803JQ72, F7DTJ5
    Related
    ENSXETP00000107744.1, ENSXETT00000107801.1
    Conserved Domains (1) summary
    pfam15376
    Location:22 → 1275
    DUF4603; Domain of unknown function (DUF4603)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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