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WRKY59 WRKY transcription factor 59 [ Glycine max (soybean) ]

Gene ID: 100127395, updated on 7-Dec-2023

Summary

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Gene symbol
WRKY59
Gene description
WRKY transcription factor 59
Locus tag
GLYMA_06G320700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See WRKY59 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (50472683..50477633)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (50943006..50947873)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene brassinosteroid receptor-like protein Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene UDP-glycosyltransferase 88F5-like Neighboring gene isoflavone 7-O-glucosyltransferase UGT6 Neighboring gene chloride channel protein CLC-f

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants. Zhou QY, et al. Plant Biotechnol J, 2008 Jun. PMID 18384508
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    50472683..50477633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014776882.3 → XP_014632368.1  probable WRKY transcription factor 2

    UniProtKB/TrEMBL
    K7KYM6
    Conserved Domains (2) summary
    smart00774
    Location:537 → 594
    WRKY; DNA binding domain
    pfam03106
    Location:325 → 379
    WRKY; WRKY DNA -binding domain

  2. XM_003526335.5 → XP_003526383.1  probable WRKY transcription factor 2

    UniProtKB/TrEMBL
    K7KYM6
    Conserved Domains (2) summary
    smart00774
    Location:537 → 594
    WRKY; DNA binding domain
    pfam03106
    Location:325 → 379
    WRKY; WRKY DNA -binding domain
Nucleotide Protein
Heading Accession and Version

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