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postn periostin, osteoblast specific factor [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100127174, updated on 4-Nov-2024

Summary

Official Symbol
postnprovided by Xenbase
Official Full Name
periostin, osteoblast specific factorprovided by Xenbase
Primary source
Xenbase:XB-GENE-478502
See related
AllianceGenome:Xenbase:XB-GENE-478502
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
osf-2; pdlpostn; periostin
Summary
Predicted to act upstream of or within cell adhesion. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human POSTN (periostin). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See postn in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (151379520..151438274)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (148502816..148562230)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier 1 Neighboring gene transient receptor potential cation channel, subfamily C, member 4 Neighboring gene SPT20 homolog, SAGA complex component Neighboring gene exosome component 8 Neighboring gene ALG5, dolichyl-phosphate beta-glucosyltransferase

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112905.1NP_001106376.1  periostin precursor

    See identical proteins and their annotated locations for NP_001106376.1

    Status: PROVISIONAL

    Source sequence(s)
    BC154911
    UniProtKB/TrEMBL
    A8WGZ4
    Conserved Domains (1) summary
    pfam02469
    Location:246368
    Fasciclin; Fasciclin domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    151379520..151438274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)