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TACC1 transforming acidic coiled-coil containing protein 1 [ Equus caballus (horse) ]

Gene ID: 100057571, updated on 17-Aug-2024

Summary

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Official Symbol
TACC1provided by VGNC
Official Full Name
transforming acidic coiled-coil containing protein 1provided by VGNC
Primary source
VGNC:VGNC:23837
See related
Ensembl:ENSECAG00000014842
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TACC1 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 27 NC_009170.3 (7011122..7131193, complement)

Chromosome 27 - NC_009170.3Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A2 Neighboring gene uncharacterized LOC106782643 Neighboring gene uncharacterized LOC106782664 Neighboring gene long intergenic non-protein coding RNA 3042

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009170.3 Chromosome 27 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cerebral cortex development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming acidic coiled-coil-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009170.3 Reference EquCab3.0 Primary Assembly

    Range
    7011122..7131193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014736552.2 → XP_014592038.1  transforming acidic coiled-coil-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HMG3
    Conserved Domains (3) summary
    pfam05010
    Location:600 → 799
    TACC; Transforming acidic coiled-coil-containing protein (TACC)
    pfam09403
    Location:705 → 798
    FadA; Adhesion protein FadA
    cl21478
    Location:607 → 692
    ATP-synt_B; ATP synthase B/B' CF(0)

  2. XM_014736553.2 → XP_014592039.1  transforming acidic coiled-coil-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2HXX3
    Conserved Domains (1) summary
    pfam05010
    Location:405 → 604
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  3. XM_023630529.1 → XP_023486297.1  transforming acidic coiled-coil-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2HXX3
    Related
    ENSECAP00000040293.2, ENSECAT00000051188.3
    Conserved Domains (1) summary
    pfam05010
    Location:543 → 742
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  4. XM_005606305.3 → XP_005606362.1  transforming acidic coiled-coil-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F5PEM5, A0A9L0SK01
    Related
    ENSECAP00000075189.1, ENSECAT00000090434.1
    Conserved Domains (3) summary
    pfam05010
    Location:572 → 771
    TACC; Transforming acidic coiled-coil-containing protein (TACC)
    pfam09403
    Location:677 → 770
    FadA; Adhesion protein FadA
    cl21478
    Location:579 → 664
    ATP-synt_B; ATP synthase B/B' CF(0)

  5. XM_023630534.1 → XP_023486302.1  transforming acidic coiled-coil-containing protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A3Q2HMG3, F7DMN7
    Related
    ENSECAP00000012590.4, ENSECAT00000015644.4
    Conserved Domains (1) summary
    pfam05010
    Location:612 → 811
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  6. XM_023630528.1 → XP_023486296.1  transforming acidic coiled-coil-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2HXX3
    Conserved Domains (1) summary
    pfam05010
    Location:405 → 604
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  7. XM_023630533.1 → XP_023486301.1  transforming acidic coiled-coil-containing protein 1 isoform X9

    Conserved Domains (1) summary
    pfam05010
    Location:132 → 331
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  8. XM_001491951.4 → XP_001492001.1  transforming acidic coiled-coil-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HMG3
    Related
    ENSECAP00000035902.3, ENSECAT00000065023.3
    Conserved Domains (3) summary
    pfam05010
    Location:600 → 799
    TACC; Transforming acidic coiled-coil-containing protein (TACC)
    pfam09403
    Location:705 → 798
    FadA; Adhesion protein FadA
    cl21478
    Location:607 → 692
    ATP-synt_B; ATP synthase B/B' CF(0)

  9. XM_023630532.1 → XP_023486300.1  transforming acidic coiled-coil-containing protein 1 isoform X8

    Conserved Domains (1) summary
    pfam05010
    Location:160 → 359
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  10. XM_023630531.1 → XP_023486299.1  transforming acidic coiled-coil-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A5F5PXI4
    Related
    ENSECAP00000052485.1, ENSECAT00000067277.2
    Conserved Domains (1) summary
    pfam05010
    Location:189 → 388
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  11. XM_005606306.3 → XP_005606363.1  transforming acidic coiled-coil-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2LT52
    Conserved Domains (3) summary
    pfam05010
    Location:571 → 770
    TACC; Transforming acidic coiled-coil-containing protein (TACC)
    pfam09403
    Location:676 → 769
    FadA; Adhesion protein FadA
    cl21478
    Location:582 → 663
    ATP-synt_B; ATP synthase B/B' CF(0)

  12. XM_023630535.1 → XP_023486303.1  transforming acidic coiled-coil-containing protein 1 isoform X11

    UniProtKB/TrEMBL
    A0A3Q2LT52
    Conserved Domains (1) summary
    pfam05010
    Location:583 → 782
    TACC; Transforming acidic coiled-coil-containing protein (TACC)

  13. XM_023630530.1 → XP_023486298.1  transforming acidic coiled-coil-containing protein 1 isoform X6

Nucleotide Protein
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