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muc2l.L mucin 2, oligomeric mucus/gel-forming like L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100049101, updated on 17-Aug-2024

Summary

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Official Symbol
muc2l.L
Official Full Name
mucin 2, oligomeric mucus/gel-forming like L homeolog
Primary source
Xenbase:XB-GENE-6046887
Locus tag
XELAEV_18022066mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cg1; xcg; cg-1; muc2; xcg1; xcg-1
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Genomic context

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See muc2l.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
49
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (19705852..19741623, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (19185061..19226612, complement)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene anoctamin 3 L homeolog Neighboring gene mucin-15 Neighboring gene solute carrier family 5 member 12 L homeolog Neighboring gene uncharacterized LOC121402954 Neighboring gene uncharacterized LOC108704974

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mucin-5AC
Names
hypothetical protein L homeolog
mucin 2, oligomeric mucus/gel-forming

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    19705852..19741623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041589595.1 → XP_041445529.1  LOW QUALITY PROTEIN: mucin-5AC

    UniProtKB/TrEMBL
    A0A8J1MUK0
    Conserved Domains (8) summary
    smart00041
    Location:4753 → 4829
    CT; C-terminal cystine knot-like domain (CTCK)
    smart00214
    Location:4597 → 4663
    VWC; von Willebrand factor (vWF) type C domain
    smart00215
    Location:350 → 395
    VWC_out; von Willebrand factor (vWF) type C domain
    smart00216
    Location:377 → 541
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:578 → 651
    C8; This domain contains 8 conserved cysteine residues
    PRK08581
    Location:3659 → 3867
    PRK08581; amidase domain-containing protein
    pfam05109
    Location:2571 → 3005
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam05467
    Location:2072 → 2468
    Herpes_U47; Herpesvirus glycoprotein U47
Nucleotide Protein Strain
Heading Accession and Version

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