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LOC100037816 ig1-as2 like 1 [ Zea mays ]

Gene ID: 100037816, updated on 6-Oct-2023

Summary

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Gene symbol
LOC100037816
Gene description
ig1-as2 like 1
Locus tag
ZEAMMB73_Zm00001d012180
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
ial1; LOB31; GRMZM2G133806
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Genomic context

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See LOC100037816 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 8 NC_050103.1 (170911233..170914417, complement)
102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 8 NC_024466.2 (169618690..169621839, complement)

Chromosome 8 - NC_050103.1Genomic Context describing neighboring genes Neighboring gene Rhodanese-like domain-containing protein pseudogene Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene uncharacterized LOC109941603 Neighboring gene uncharacterized LOC109941608

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The indeterminate gametophyte1 gene of maize encodes a LOB domain protein required for embryo Sac and leaf development. Evans MM. Plant Cell, 2007 Jan. PMID 17209126, Free PMC Article
  2. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
  3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
  4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein IAL1
Names
ASYMMETRIC LEAVES2
IG1/AS2-like protein 1
LOB transcription factor
ig1-as2 like1
putative LOB domain-containing family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112516.2 → NP_001105986.2  protein IAL1

    Status: VALIDATED

    Source sequence(s)
    BT067836, EF081455, FL480447
    UniProtKB/TrEMBL
    B6TCC6
    Conserved Domains (1) summary
    pfam03195
    Location:34 → 130
    DUF260; Protein of unknown function DUF260

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050103.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    170911233..170914417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_556669.3 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001254817.1: Suppressed sequence

    Description
    NM_001254817.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1YKY7.1 GenPept UniProtKB/Swiss-Prot:A1YKY7

Gene LinkOut

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Molecular Biology Databases
Research Materials